## Computational Molecular Biology, aka Algorithms for Computational BiologyHome * Syllabus * Course Information * Readings and Resources * Lecturers, TAs, Office Hours * Homework Submission |

**Monday, Wednesday, Friday: 2:45-4:15 PM, fifth floor classroom,
room 5206, 4444 Forest Park Boulevard building**

All meetings may include some lecture style presentation and/or in-class collaborative learning.

Date | Teacher | Topics | Module Guides | |
---|---|---|---|---|

Aug 24 | Class overview + Mathematica 1: bring laptops! | Mathematica Module | ||

Aug 26 | Mathematica 2 | |||

Aug 28 | Mathematica 3 | |||

Aug 31 | Probability 1 | Probability Module | ||

Sep 2 | Probability 2 | |||

Sep 4 | Probability 3 | |||

Sep 7 | No class | Labor Day | ||

Sep 9 | Probability 4 | |||

Sep 11 | Probability 5 | |||

Sep 14 | Probability 6 | |||

Sep 16 | Probability 7 | |||

Sep 18 | No class | C&SB/MGG retreat | ||

Sep 21 | Probability 8 | |||

Sep 23 | No class | Yom Kippur | ||

Sep 25 | TF Binding Motifs 1 | Motif Module | ||

Sep 28 | TF Binding Motifs 2 | |||

Sep 30 | TF Binding Motifs 3 | |||

Oct 2 | TF Binding Motifs 4 | |||

Oct 5 | TF Binding Motifs 5 | |||

Oct 7 | HMMs 1 | HMM Module Guide | ||

Oct 9 | HMMs 2 | |||

Oct 12 | HMMs 3 | |||

Oct 14 | HMMs 4 | |||

Oct 16 | No Class | Fall Break | ||

Oct 19 | HMMs 5 | |||

Oct 21 | HMMs 6 | |||

Oct 23 | Alignment / Profile HMMs 1 | Profile HMMs | ||

Oct 26 | Alignment / Profile HMMs 2 | |||

Oct 28 | Alignment / Profile HMMs 3 | |||

Oct 30 | Alignment / Profile HMMs 4 | |||

Nov 2 | Regulatory Network inference 1 | TF Network Module | ||

Nov 4 | Regulatory Network inference 2 | |||

Nov 6 | Regulatory Network inference 3 | |||

Nov 9 | Regulatory Network inference 4 | |||

Nov 11 | Regulatory Network inference 5 | |||

Nov 13 | Modeling gene regulation dynamics 1 | SysBio Guide | ||

Nov 16 | Modeling gene regulation dynamics 2 | |||

Nov 18 | Modeling gene regulation dynamics 3 | |||

Nov 20 | Modeling gene regulation dynamics 4 | |||

Nov 23 | Modeling gene regulation dynamics 5 | |||

Nov 25 | No class | Thanksgiving holiday | ||

Nov 27 | No class | Thanksgiving holiday | ||

Nov 30 | Modeling gene regulation dynamics 6 | |||

Dec 2 | Modeling gene regulation dynamics 7 | |||

Dec 4 | Modeling gene regulation dynamics 8 |